PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0423s0029.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 207aa    MW: 23549.8 Da    PI: 9.5135
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0423s0029.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like331.4e-101203655
              G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                         m+v+gLt++hvkSHLQkYR+
  Kalax.0423s0029.1.p  1 MDVPGLTIYHVKSHLQKYRV 20
                         9******************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.4E-9121IPR009057Homeodomain-like
PfamPF143799.6E-95191IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MDVPGLTIYH VKSHLQKYRV AKFVPESSNR GKYERRSISE MLPNFSATSA VQLNEALRLH  60
MEAERQLSHR MEASLKLKIE AQGRYMDRIT EDLRAGKTVA MKPAKPFNPI TSLPSLCDES  120
ESNSPKDQLS EPHLQSRALK RFRVEHDLVS APQMPDNYAP QYLTRPYDGQ SEMFNNQGLR  180
RVQYPVHDMS VPWNLTVSGP SPLMPN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010653298.12e-57PREDICTED: protein PHR1-LIKE 1-like isoform X2
TrEMBLB9HCX36e-55B9HCX3_POPTR; Uncharacterized protein
STRINGPOPTR_0006s10190.12e-54(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.28e-28G2-like family protein